Affiliations:
[1] Department of Microbiology and Immunology, Keio University School of Medicine, Tokyo, Japan.
[2] RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.
[3] Infectious Disease and Microbiome Program, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
[4] Center for Computational and Integrative Biology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA.
[5] Department of Microbiology and Physiological Systems, Program in Microbiome Dynamics, UMass Chan Medical School, Worcester, MA, USA.
[6] JSR-Keio University Medical and Chemical Innovation Center, Keio University School of Medicine, Tokyo, Japan.
[7] Human Biology Microbiome Quantum Research Center (Bio2Q), Keio University, Tokyo, Japan.
[8] Department of Bioinformatic Engineering, Graduate School of Information Science and Technology, Osaka University, Osaka, Japan.
[9] Division of Physiological Chemistry and Metabolism, Graduate School of Pharmaceutical Sciences, Keio University, Tokyo, Japan.
[10] Cooperative Major in Advanced Health Science, Graduate School of Advanced Science and Engineering, Waseda University, Tokyo, Japan.
[11] Division of Gastroenterology and Hepatology, Department of Internal Medicine, Keio University School of Medicine, Tokyo, Japan.
[12] Vedanta Biosciences, Cambridge, MA, USA.
[13] Department of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA.
[14] These authors contributed equally: Munehiro Furuichi, Takaaki Kawaguchi, Marie-Madlen Pust, Keiko Yasuma-Mitobe.